FastQCFastQC Report
Tue 13 Aug 2019
HMJY2BGX7_n01_dpErk_WE_16.5hpf_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJY2BGX7_n01_dpErk_WE_16.5hpf_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62719961
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCCGA381200.020.1633957
TCCCGAG416950.019.5825338
CCCGAGT284050.019.1919259
CCGGACA184500.018.7612341
CCCTCCC273450.018.7298535
AAAGAGT299900.018.171036
AGCCGGA113900.018.0975278
CAAAGAG313750.017.9929435
GCCCGAA126850.017.9894281
GCTTTGA308250.017.89589110
ATGTCCC353400.017.7774141
ACCCGAC158400.017.68026210
TAACGAC194800.017.6280331
TACCCGA158850.017.6161869
CACTAAG234200.017.5422971
CCTCCCG297800.017.5160776
GTGGGAC145100.017.50378
GCCATGG235400.017.4902631
CCCGAGG139850.017.4139469
GGGCCAT175000.017.3465351
Produced by FastQC (version 0.11.5)