FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3240.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3240.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9742540
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGGGG16050.07.414102638
AGGGGGG32800.06.615684570
GGGGGGT44200.06.018903714
GTAGGGG12456.5321E-75.90361537
AAGGGGG38700.05.78787769
AGCGTCG44100.05.317324670
GGGGGGA45650.05.290605520
GGTGGGG40100.05.1499718
TATAGAC14308.342406E-65.139623662
Produced by FastQC (version 0.11.5)