FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3238.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3238.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2938127
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGTAGG7856.336177E-77.57953970
CGTGTAG7702.9942847E-56.817994669
TTAATGG6300.00757583326.1108393
AAGGGGG11801.57256E-65.932141370
GCTCGAT7600.0084534515.5258821
TTATAAG8650.00600811655.260060335
GAGCGTC13055.2844378E-55.09573270
AGGGGGG9000.009547035.05550370
TCGTGTA11803.3715897E-45.042234468
Produced by FastQC (version 0.11.5)