FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3236.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3236.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3580621
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATACGGG4600.002495827.609559516
TATAGAC5200.0082401886.730593762
CTCCCGT8558.441204E-45.7307641
CACAAGG9700.00413230855.0513441
Produced by FastQC (version 0.11.5)