FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3227.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3227.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7204445
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG28150.05.96790170
GCCATGG18409.313226E-95.3258991
GCCTCGT13955.3150634E-65.2686311
AAGGGGG28400.05.175873369
TAGACGC10250.00147756585.121734664
GCCGGCT13206.389094E-55.0377011
Produced by FastQC (version 0.11.5)