FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3222.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3222.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3951359
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG12550.08.924437570
GGGTTAA6058.004293E-57.520585554
TATACTG6050.00497421586.36349155
AAGGGGG15852.4738256E-106.182981569
GGGGTTA6450.009659435.969007553
CATGGAC9650.00387514995.07754043
AAAGGGG21008.019924E-95.00001368
Produced by FastQC (version 0.11.5)