FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3215.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3215.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2454918
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG7502.5902154E-67.466657670
GGGGGGA10603.121204E-86.934519320
TGTAGGG8954.993377E-66.64803770
AAGGGGG9106.4689157E-66.53845469
CTCCGCT8154.5747802E-46.01177261
GTGTAGG8852.0424083E-45.932196669
CGTGTAG9253.7244678E-45.67566968
GAGCGTC13955.3007116E-65.26881168
Produced by FastQC (version 0.11.5)