FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3212.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3212.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2647026
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGGGG10750.011.39544169
AGGGGGG12050.09.87578570
TAGGGGG4351.4804091E-48.85031238
AAAGGGG16350.07.49241668
GGGGGCG9754.982212E-87.179138744
GGGGGGA17700.07.119105320
CGGGGGG7956.177772E-67.044481312
GGGGGGC8803.83734E-66.76116286
GCGGGGG7358.649586E-46.19087711
GGGGTGG14356.7502697E-96.097840317
GGGGGTG14457.870767E-96.055526716
AAAAGGG26200.05.877910667
TAGATCG8952.3822546E-45.865637366
GGTGGGG14152.0020525E-75.68866243
TGTAGGG9555.7302543E-45.497426567
GGGCGGG10403.090115E-45.38465946
GGGTGGG14501.9071831E-65.31058917
GGGGGAG13351.3787274E-55.243785421
GGGGCGG11702.9690948E-45.0855118
GGGATTA9000.00954388555.055596453
Produced by FastQC (version 0.11.5)