FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3211.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3211.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2620460
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGGGG12001.8189894E-127.87483369
AAAGGGG14755.456968E-126.881210368
AGGGGGG13502.4738256E-106.740854370
GCATAAT5900.00382903736.52478651
GGTGGGG16703.2117896E-85.44940218
GGGGGGA19651.4770194E-95.34380620
GGGTGGG15309.526393E-75.26172817
GGGTCAA8750.00687205145.199988427
AAAAGGG24302.0008883E-115.18497667
Produced by FastQC (version 0.11.5)