FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3207.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3207.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4276362
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGT16105.4569682E-116.305347414
CGGCCAG8457.248518E-45.79973615
GGGTGGG15502.1665801E-75.419770717
CGTGTAG11705.1772055E-55.384398567
GGGGTGG15702.8227078E-75.35110416
GTGTAGG11351.8904185E-45.242079768
TGTAGGG12201.0021768E-45.163787469
Produced by FastQC (version 0.11.5)