FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3198.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3198.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3260115
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG11650.09.31349370
AAGGGGG13353.6379788E-127.34074769
TAGGGGG5900.0038268626.52525538
CGGGGGG8551.2735037E-46.14075712
TGCGTTG6300.00757256856.11114037
GCGGGGG7550.00119508066.02688911
GAGCGTC21301.8189894E-125.751289470
GGGTGGG13605.5874443E-75.661705517
AAAGGGG18653.8562575E-105.62996868
GGTGGGG14051.0451022E-65.480453518
GGGGGGT17551.7294951E-85.38497214
GGGGGGA19551.2987584E-95.370787649
CGTGTAG12502.5896585E-55.320107570
GTGGGGG14257.811737E-65.157840744
GGGGGTG14409.430814E-65.10450415
GCGTCGT18606.608752E-85.080747670
CGTCGTG18909.528412E-85.00010170
AGCGTCG20301.8275387E-85.000100670
Produced by FastQC (version 0.11.5)