FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3196.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3196.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2757518
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG9001.135777E-87.777846370
GGGGGTG12553.3833203E-106.973057715
GGGGGGT14101.2732926E-116.951298714
GGGGGGA14902.415618E-96.107879620
GGGTGGG12701.4751458E-76.06326617
AAGGGGG10203.7569946E-55.833278768
CACTGCA7700.0097500985.45459365
GTAGGGA9100.00185711235.384662665
CGTGTAG9200.00213074855.326133770
GGGGTGG12502.5845358E-55.32062616
GGTGGGG13752.2999297E-55.09132318
GGGCGGG8950.0089413715.08402829
Produced by FastQC (version 0.11.5)