FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3183.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3183.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1087627
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCCGC1950.002300690912.5636981
AGGGGGG5652.0008883E-1111.76953270
AAGGGGG5108.202369E-810.29378669
GTAAGAA4500.00201145517.77752836
GCGTCGT4750.0034169557.368183668
AGCGTCG4900.00462675057.14262767
GAGCGTC4950.005106787.0704866
AAAGGGG7107.616432E-56.901186568
CTCCAAC5200.0082261876.73086234
GGGGGGT8952.3762634E-45.865732751
GGGGGTG8150.00297029365.583155615
Produced by FastQC (version 0.11.5)