FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3182.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3182.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2691704
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG11400.08.59630570
AAGGGGG12050.08.42289669
GGGGGAT6805.210737E-67.72027751
AAAGGGG16550.07.40151468
GGGGGGA18000.07.194822320
ATGGGGG7753.2771437E-56.773920569
GGTGGGG16852.7284841E-116.23178118
GGGTGGG16607.6579454E-105.90403417
GGGGGGC9651.0579941E-45.803090643
CTCCTGT7300.0054139255.753299732
CGTGTAG9801.321851E-45.71405568
TGTAGGG9253.7260645E-45.675552470
GCGTCGT15956.819573E-85.48577470
GGGGTGG17251.1559678E-85.47895616
AGCGTCG16703.2190655E-85.44888269
GGGGGGT21306.91216E-115.423525314
GGGGGTG18207.1049726E-95.38559815
GGGGGTT9808.1122766E-45.35692752
GTGTAGG9959.939537E-45.276169369
GGGGGAG15309.531268E-75.261616721
Produced by FastQC (version 0.11.5)