FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3180.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3180.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5423280
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG21000.010.50008970
AAGGGGG23150.08.46620469
TAGGGGG8806.304617E-87.55625538
GGGGGGA30150.06.8498420
AAAGGGG31900.06.473110768
TGGGGGG26150.05.487162638
GGGGGAG26200.05.344049521
GGGTGGG24453.6379788E-125.296910317
Produced by FastQC (version 0.11.5)