FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3179.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3179.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3777487
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG12253.6379788E-127.71397270
AAGGGGG14008.185452E-116.74963669
CGTGTAG14306.2700565E-96.118551364
CGGGGGG9852.1976706E-56.04140312
AAAGGGG19001.6370905E-115.89441968
GTCGTGT21555.4387783E-105.197004370
GGCATTG9450.00297801835.185866411
GGGGGTT10805.280417E-45.18504352
GTAGGGA13551.7900493E-55.16577367
Produced by FastQC (version 0.11.5)