FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3176.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3176.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2800308
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGGGG11605.638867E-117.54311770
GGGGTAA4200.0094292367.50041521
TCGCCCC5050.00619728266.931695515
AGGGGGG9854.514677E-76.751039539
GGGGGTG12154.1235216E-76.050257715
GGGGGGT14102.9687726E-85.95830814
GGTGGGG11506.393335E-65.782928518
TTACTCT7300.0054159415.75312663
TGTAGGG8659.783272E-45.664547461
GCGGGGG7450.006770985.638198411
CTTTAGT7450.0067816745.637392542
CGGGGGG8100.00276457085.61789612
GTGTAGG8100.00276984745.616993460
GGTTGGG7600.0084406185.52662218
GGGGGGA14101.1172124E-65.46129520
GGGTGGG11554.2088832E-55.454847317
GAGCGTC14301.4654797E-65.384432369
GGGGTGG12452.4168125E-55.342138316
GGGGGAG13854.6460464E-65.307152721
GGGGGTT8650.0060094575.25993752
Produced by FastQC (version 0.11.5)