FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3174.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3174.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8395476
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG29100.09.02061370
AAGGGGG34500.06.999578569
CGGGGGG21100.06.30432712
GGGGGGC23150.05.7449316
GGGGGGA43350.05.32919220
AAAGGGG48000.05.24965368
TAGGGGG14106.4604337E-65.212482538
Produced by FastQC (version 0.11.5)