FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3171.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3171.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5758406
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG20400.08.5782870
AAGGGGG22300.06.905647869
TGTAGGG18651.0913936E-116.00525670
GTGTAGG18959.822543E-115.72544369
GGGGTAA7550.0078604765.562719354
GTATAGA9454.979734E-45.555361361
TAGGGGG10453.3133017E-45.358664538
GGGGGGC17752.2573658E-85.3238046
CGTGTAG20102.6466296E-95.223743468
GGGGGGT25753.6379788E-125.165809614
GCGGGGG15053.869227E-65.11685511
TGTATAG11057.2931824E-45.06765260
Produced by FastQC (version 0.11.5)