FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3169.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3169.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4887347
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG17550.09.77198770
AAGGGGG20400.06.519479369
TAGACGC7004.799908E-46.499805564
TGGGGGG24950.06.31230738
CAAGGGT8053.9044317E-46.0867123
GGGGTTA7650.00140164025.94747354
GGGGGTA7500.0073049575.599775353
AAAGGGG27800.05.287665468
CGTGTAG14601.2126802E-55.034198870
Produced by FastQC (version 0.11.5)