FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3165.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3165.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3071008
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGGGG13650.07.691872669
AGGGGGG11051.546141E-107.601504370
GGGGGGT13801.8822902E-86.08790114
GTCTCAC7550.00119723826.02595331
AAAGGGG18203.274181E-115.96120168
GGGGGTT8300.0036883975.482778515
GTAGCTT8650.00601392575.25964741
GGGTGGG10704.6210585E-45.23411617
CGCAACG8700.0064315385.22958953
CGTGTAG10200.00138388195.146767669
AGCGTCG14358.870966E-65.12174570
GAGCGTC14451.006208E-55.08621869
GGGGGTG13105.613302E-55.077123615
Produced by FastQC (version 0.11.5)