FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3163.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3163.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2768371
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGGGG10701.8784503E-66.21479668
GGATACT6200.0064147786.20963350
AGGGGGG11357.8485937E-76.167356570
GTGTAGG9858.6807006E-45.329910370
GTTTTCG29700.05.3028961
Produced by FastQC (version 0.11.5)