FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3146.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3146.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5338649
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG17900.07.6256370
AAGGGGG21450.06.20023669
TGGGGGG23850.05.57641838
GTTAAGA8550.00524710035.32134061
AAAGGGG27800.05.161679368
TACGATC9650.0038770255.0774372
Produced by FastQC (version 0.11.5)