FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3145.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3145.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6365315
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG21550.06.49655870
TAGGGGG11153.7971986E-65.96397438
GGGGGTA8700.0064278015.23008120
AAGGGGG25503.6379788E-125.215717370
CCCAAGC8750.00688372235.199541
GGGTTAA8900.00838706555.112309554
Produced by FastQC (version 0.11.5)