FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3130.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3130.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4561607
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG18850.08.35518269
AAGGGGG18400.07.037827568
CCCCGTC8050.00257002775.652744318
GGCAAGC7500.00729330685.60056519
AAAGGGG26250.05.599766767
CGTGTAG14503.2749267E-75.551492767
GTGTAGG14553.5081393E-75.532476468
ACCAGGC7600.0084446365.52657037
GCGTCGT21605.802576E-105.18519770
TACTTCG8850.0078411045.14181769
Produced by FastQC (version 0.11.5)