FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3128.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3128.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3116299
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG12100.011.85986270
AAGGGGG13300.010.26297569
GGGTTAA4158.86514E-59.2772454
GCACGCC3200.0088770778.75026534
GGGGGGA16500.08.27284420
AAAGGGG17700.07.711726768
GGGGGGT18800.07.261323514
GGGTGGG14857.2759576E-126.83533417
GGGGGAG15900.06.82399621
GGGGTGG14959.094947E-126.78993916
CGGGGGG7803.579075E-56.73129712
ACGGCGC5750.00292038756.69574748
GGTTAAA7551.701956E-46.490158655
GGGGGTG17105.456968E-126.345628315
TACCCTT6750.00225816436.2224132
CTAAGCA8659.784566E-45.66454849
GGTGGGG15251.5442492E-75.508451518
TCGTGTA18055.84987E-95.429527370
GCGGGGG8450.00456003435.38503811
GCATAAG8450.0045634825.38469253
Produced by FastQC (version 0.11.5)