FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3127.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3127.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8544547
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG29850.08.91119470
AAGGGGG34350.08.04932369
AAAGGGG45850.06.106743368
GGGGGTA12204.474732E-76.024500453
GGGGGGA43800.05.833656320
TGTGGGG20805.456968E-125.72106936
TGTAGGG33950.05.25762368
TGGGGGG40800.05.23264338
GGTGGGG38150.05.13792918
Produced by FastQC (version 0.11.5)