FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3125.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3125.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6527596
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG21800.07.22464570
TAGGGGG10351.0635795E-66.424812338
GGGGGGA30750.06.033247520
GAGTGTA16453.8344297E-95.74440568
CCCGCGA8400.0042626335.41619871
GTGTAGG25051.8189894E-125.309207467
TGTAGGG24001.2732926E-115.249747868
CGTGTAG28700.05.24381170
TCTAGGG10050.00113564675.2240728
GTAGGGA24907.2759576E-125.20059369
AAGGGGG25251.0913936E-115.128505769
Produced by FastQC (version 0.11.5)