FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3122.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3122.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7980893
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG32350.010.3864470
AAGGGGG35450.07.996861569
AAAGGGG47050.05.727720768
TAGGGGG13555.2150426E-75.682430738
TGGGGGG41750.05.61654338
GGGGGAG36800.05.32634221
CGTGTAG30700.05.244090669
GTGTAGG29800.05.167805770
TGTAGGG28550.05.148882470
GGGGGGA42900.05.140138620
Produced by FastQC (version 0.11.5)