FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3119.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3119.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5575695
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG19950.08.24581870
TAGGGGG10109.518226E-86.930367538
AAGGGGG23100.06.51507969
GGGTTAA7600.0012957545.98661454
GGGGTTA10052.9996034E-55.920225653
GTGTAGG24502.5465852E-115.142869
GGGGGGT28950.05.07839214
GCGGGGG15305.2806154E-65.033255611
GGGGGTT17454.7009962E-75.013955652
Produced by FastQC (version 0.11.5)