FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3115.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3115.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3505246
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGGGG10302.8012437E-107.81624112
AAGGGGG13801.8189894E-127.355003470
AGGGGGG13001.0186341E-106.99993470
GGGTGGG14705.456968E-126.90548517
GGGGGGC9451.6387985E-66.6665096
TAGGGGG6300.00103755816.66631938
GGGGTTA5850.00350134286.58094753
GGGGGGT19050.06.247373614
GCGGGGG10155.267346E-66.2073711
CGTAACC6250.0069758116.15976673
GGTGGGG14952.6084308E-96.08776818
GGGGTTG6950.00312960966.04379916
GGGGTGG16001.9845174E-95.906868516
GGGGGGA19704.7293724E-115.68595620
GTGTAGG11708.56515E-65.68370770
GGGGGTG17653.4015102E-95.55314815
CGTGTAG13252.0668485E-65.547117770
GTCACCG7700.0097586545.4542611
GGTTGGG10500.00202705925.000666618
Produced by FastQC (version 0.11.5)