FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3112.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3112.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4070572
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG13801.8189894E-127.355107370
GGGGGGA16851.7644197E-106.024137520
GGGTGGG15304.438334E-95.94803317
AAGGGGG16708.913048E-105.868219469
TTCGCCC8700.00105270725.632141625
TGTAGGG15056.8822374E-75.348862670
GGTGGGG15953.9198676E-75.26680618
GTGTAGG14702.4801157E-65.238120670
GCGTCGT24857.2759576E-125.211292370
CGTGTAG16205.41002E-75.185146369
GGGGGGT18556.229129E-85.09405151
GAGCGTC27103.6379788E-125.036924470
Produced by FastQC (version 0.11.5)