FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3107.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3107.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8354851
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG27550.08.38486270
TAGGGGG13400.07.835545538
GGGGGGT39100.07.072335714
AAGGGGG32000.06.999837469
CGGTATA5250.0090397236.666512550
GGGGGGA42500.05.847378320
GGGGGTG35800.05.76878215
TGTAGGG30650.05.709697270
GGGTTAA11755.5408083E-55.361610454
AAAGGGG47600.05.29396368
TGGGGGG34400.05.29057545
GGTGGGG34500.05.27568218
GGGGTGG36500.05.274450316
GGGTGGG34850.05.222604317
GGGGGTA13055.2861116E-55.096063620
Produced by FastQC (version 0.11.5)