FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3104.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3104.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7923885
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG27750.07.69373670
GGGTGGG29500.06.0515317
AAGGGGG31250.06.04788169
GGGGGTG33450.05.860707315
GGTGGGG30850.05.673249218
GGGGTGG33650.05.617594716
GGGGGGT33900.05.57630814
Produced by FastQC (version 0.11.5)