FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3103.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3103.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3518979
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG12500.08.68000270
AAGGGGG13751.8189894E-127.381819269
GGGGGGT18451.8189894E-126.261142314
GGGGGTG16801.6370905E-106.04278415
GGGGGAT10002.7792797E-55.94957951
GTAGGGA13701.0414078E-75.875913667
TGTAGGG13701.04169885E-75.875829766
GGGGTGG16403.5452103E-95.763179316
GGGGGGA18301.4133548E-95.54613450
GGGTGGG15805.5513738E-85.53836917
TCGTGTA18304.55384E-85.16393570
CACCAGT8900.008387015.112142664
Produced by FastQC (version 0.11.5)