FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3101.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3101.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2795401
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG9700.09.74204670
CTTTACG4350.00144168368.04593848
AAGGGGG11901.0186341E-107.352642569
TAGGGGG4800.00379015927.291239738
TGGGGGG12903.0571755E-86.23994538
GAGTGTA8601.3819295E-46.10418566
AGATCGG45700.05.97349969
GCGGGGG7350.0058256415.715382611
GTGTAGG12901.2606506E-65.697544670
AGCGTCG20301.8189894E-115.68952670
GGGGGCG10505.8425314E-55.66653845
GAGCGTC22803.6379788E-125.526190370
GGGGGGC8250.003441075.515025644
CGGGGGG7650.0090583955.4912512
GATCGGA51300.05.38974170
AAAGGGG16301.09082976E-75.36778468
GGGGTGG12653.152723E-55.257361417
GGGGGTG12703.358884E-55.237319515
TAGATCG13401.4737609E-55.223761670
GTCAAAG14106.451146E-65.2123681
Produced by FastQC (version 0.11.5)