FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3100.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3100.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7057431
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG27050.08.79851970
TAGGGGG11454.1836756E-117.64159538
AAGGGGG31150.06.62911869
TGTGGGG18750.06.533285636
GGGGTGG32900.05.958079316
CGGGGGG19604.0017767E-115.715013512
GGGGGGA39600.05.56853620
GGGTTTA12605.0303206E-65.55543654
GCGGGGG20251.0004442E-105.531568511
GGGGGTA11001.1817506E-45.40897553
GGGGGGT40400.05.372009814
GGTGGGG36550.05.362858318
GGGTGGG33650.05.30486817
GGGGGTG36200.05.221696415
Produced by FastQC (version 0.11.5)