FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3097.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3097.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4990366
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAG3800.00384665128.288981
AGGGGGG18600.08.09164670
AAGGGGG20600.06.286411369
GGGGTAA7450.00101974996.107141554
AGCGTCG30850.05.44587270
GAGCGTC31450.05.230527469
GTAGGGA18757.9620804E-85.039851767
Produced by FastQC (version 0.11.5)