FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3095.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3095.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4134668
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG15250.010.55717570
AAGGGGG18150.08.48437869
TAGGGGG7051.0221938E-67.94291838
GGGTGGG18800.06.88874917
AAAGGGG24750.06.787502368
GGGGTTA6208.650507E-46.77398253
GGGGTGG21100.06.30441616
GGGGGGT22450.06.081238314
GGTGGGG18701.0913936E-115.98991418
GGGGGTT11302.9775505E-55.57491252
CGTGTAG18602.1191227E-95.456686563
GTAGGGA18106.2718755E-95.414064466
AGGGTAA8600.00561551425.29059670
GTTGCAC10805.283055E-45.1848981
GGGGGAT10150.00129699145.172064351
GCGGGGG12209.991299E-55.16477211
TGTAGGG18606.625669E-85.080363365
GGGGGTG20755.8971636E-95.06124615
Produced by FastQC (version 0.11.5)