FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3094.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3094.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6267742
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG20450.08.21513870
AAGGGGG25500.06.313558669
TAGGGGG9606.1556493E-45.468605538
TGGGGGG25601.8189894E-115.0584638
Produced by FastQC (version 0.11.5)