FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3092.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3092.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5154637
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG18550.08.11334470
AAGGGGG20900.07.200518669
CAAGGGC7750.00163837285.87043953
GGGGTAA8900.00140429515.5055554
CGTCTAG7700.0097630265.45416075
GGGTGGG25850.05.41631917
CGCCCGG8450.0045687995.38434036
GGGGGTA9858.687212E-45.32988353
CGTGTAG17408.075767E-85.22956769
GGTGGGG25803.6379788E-125.155575318
AAAGGGG29450.05.110045468
Produced by FastQC (version 0.11.5)