FastQCFastQC Report
Thu 12 Sep 2019
HMJVKBGX7_n02_QG3089.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJVKBGX7_n02_QG3089.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3753535
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGTTA6703.558791E-57.31314953
GGGTTAA5450.00166154097.063946254
TAGTAAG5150.00750613456.795943325
AGGGGGG12602.6957423E-96.66685270
AAGGGGG14854.9112714E-116.5995170
GGGGGGA18656.366463E-115.81824320
TGGGGGG17004.8061338E-85.35251938
GTGTAGG8700.00642636145.230030570
GCCCATC8750.00688063965.1995942
Produced by FastQC (version 0.11.5)