HMJVKBGX7_n01_QG3162.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMJVKBGX7_n01_QG3162.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3154224
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCTTAACATCTCGTAT	10947	0.34705842070823123	TruSeq Adapter, Index 11 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	1570	56.399246	48
CGTATGC	1590	55.250458	46
CGCCTTA	1630	54.537914	33
GTATGCC	1625	54.275833	47
CCTTAAC	1680	53.331413	35
GCCTTAA	1670	53.231613	34
TCGTATG	1710	51.577908	45
CTTAACA	1695	51.001114	36
ATGCCGT	1815	48.400463	49
CACGCCT	1940	45.646305	31
CTCGTAT	1985	43.9034	44
TCACGCC	2035	43.688084	30
TTAACAT	2040	42.375927	37
GTCACGC	2095	42.269802	29
TAACATC	2040	41.174988	38
TGCCGTC	2115	41.03871	50
AGTCACG	2265	38.9427	28
GCCGTCT	2315	37.49325	51
ACGCCTT	2380	37.060425	32
CTGCTTG	2385	36.5413	59