HMJVKBGX7_n01_QG3143.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMJVKBGX7_n01_QG3143.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3288852
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTACCTGCAATCTCGTAT	7169	0.21797879624866062	TruSeq Adapter, Index 10 (97% over 38bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	1055	53.078022	48
CGTATGC	1190	48.234447	46
GTATGCC	1210	46.85868	47
TCGTATG	1330	42.893982	45
ATGCCGT	1300	42.267204	49
TACCTGC	1480	42.093853	34
ACTACCT	1515	41.817623	32
CTACCTG	1540	40.6811	33
CACTACC	1585	39.529125	31
GTCACTA	1755	35.899532	29
ACCTGCA	1800	34.804943	35
CTCGTAT	1725	32.666092	44
TGCCGTC	1735	31.468231	50
CCTGCAA	1985	30.85588	36
CTGCTTG	1645	30.426386	59
GCCGTCT	1790	29.52372	51
GCAATCT	1890	29.443031	39
CAGTCAC	2155	29.399364	27
TCACTAC	2225	28.316261	30
CCAGTCA	2245	28.221199	26