HMJVKBGX7_n01_QG3093.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMJVKBGX7_n01_QG3093.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3585887
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGGAGCTATCTCGTAT	6766	0.1886841386803321	TruSeq Adapter, Index 7 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	1145	49.8236	46
TATGCCG	1180	48.93898	48
GTATGCC	1195	48.61756	47
TCGTATG	1335	42.208275	45
ATGCCGT	1385	41.695305	49
TAGGAGC	1455	40.89205	34
GGAGCTA	1455	40.41097	36
CTAGGAG	1480	40.201305	33
CACTAGG	1490	39.229015	31
ACTAGGA	1605	37.290504	32
GCTATCT	1440	37.18621	39
GAGCTAT	1530	37.057537	37
GTCACTA	1770	33.617	29
TGCCGTC	1820	31.729671	50
AGCTATC	1740	31.378225	38
CTCGTAT	1710	31.314703	44
CTGCTTG	1815	31.239023	59
GCCGTCT	1950	29.614359	51
AGGAGCT	2005	29.500225	35
TCACTAG	2130	28.756878	30