HMJ53BGXB_n02_30893.TR4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMJ53BGXB_n02_30893.TR4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19512136
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCC	53256	0.2729378270016158	No Hit
CCGGGAACGTATTCACCGCGGCGTGCTGATCCGCGATTACTAGCGATTCC	30397	0.155785097028844	No Hit
CGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCCG	26869	0.137704042243248	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	26229	0.1344240323048179	No Hit
GCCCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATT	24979	0.12801776289382158	No Hit
CGGAAAGACCCCGTGAACCTTTACTATAGCTTGACACTGAACATTGAATT	21374	0.1095420819125082	No Hit
CGGGAACGTATTCACCGCGGCGTGCTGATCCGCGATTACTAGCGATTCCG	20458	0.10484756768813008	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGGGAA	50050	38.52083	1
TGTGTAT	3760	36.83229	145
GCTGTAT	3965	35.855648	1
CCATTGT	38555	35.61906	145
GATCCTG	7975	35.302013	5
AACGTAT	62435	34.099346	6
GAACGTA	67655	31.681742	5
ACGTATT	69165	31.036734	7
CGTATTC	71685	30.01762	8
GGGAACG	69015	29.905066	3
TGGATGC	15235	29.475023	3
CGGGAAC	66890	29.363714	2
CATTGTA	25330	29.111797	145
GGAACGT	72145	28.518091	4
GGGAAAA	16490	28.229136	145
GTATTCA	77025	28.098532	9
CAATTAG	7660	27.76173	9
GTTAGAG	14795	27.75875	5
GGCTCAG	12250	27.064535	4
GGATGCC	18880	25.360767	4