HMJ53BGXB_n01_30904.TR1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMJ53BGXB_n01_30904.TR1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21562213
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	130896	0.6070619931265867	No Hit
CTGGAAGCAGGGCATTTGTTGCTTCAGCACCGTAGTGCCTCGTCATCACG	30640	0.14210044210211634	No Hit
CCTCGATCGATTAGTATCTGTCAGCTCCATGTGTCGCCACACTTCCACCT	27841	0.12911939975734402	No Hit
GGAATATTAACCTGTTTCCCATCGACTACGCCTTTCGGCCTCGCCTTAGG	27824	0.12904055812824036	No Hit
GCCTAACTGCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCC	26856	0.12455122301222049	No Hit
GTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGC	25545	0.1184711420854622	No Hit
CTTCAGCACCGTAGTGCCTCGTCATCACGCCTCAGCCTTGATTTTCCGGA	22909	0.10624605183150729	No Hit
CGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGA	22178	0.10285586178005013	No Hit
CTTAACCATGACTTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT	22165	0.10279557112250028	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21853	0.10134859534130379	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCGATT	6455	76.83923	6
TCGATTA	6645	74.723915	7
CGATTAG	6915	71.91111	8
GATCGAT	6935	71.311745	5
TCGATCG	7965	61.0863	3
CGATCGA	8275	59.674137	4
TCAGATT	5885	52.4902	2
TTGAACG	5930	52.196003	7
TATGATG	7245	52.1538	145
GATTGAA	5930	51.359146	5
CCTAACT	8455	50.257294	2
GATCCAG	12675	49.429813	5
GCGACTA	3110	48.497356	2
ATCCAGC	13085	47.991833	6
GATCCAA	6720	47.263733	5
ACACGTA	1775	46.98791	145
CAGATTG	6685	45.44851	3
GGAAGCA	10745	44.606903	3
ATCCAAC	7515	43.32519	6
TCATTAG	9425	41.16039	3