HMJ53BGXB_n01_2397.TR2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMJ53BGXB_n01_2397.TR2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21522125
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	272404	1.2656928625774637	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	77491	0.3600527364282105	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	70431	0.32724928416687477	No Hit
CTGGAAGCAGGGCATTTGTTGCTTCAGCACCGTAGTGCCTCGTCATCACG	29833	0.13861549452017402	No Hit
GTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24817	0.1153092457180692	No Hit
CGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23496	0.10917137596775411	No Hit
GCCTAACTGCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCC	22869	0.10625809486749102	No Hit
CTTCAGCACCGTAGTGCCTCGTCATCACGCCTCAGCCTTGATTTTCCGGA	22007	0.10225291415229677	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATTAG	5765	48.410297	8
ACTCTAG	10905	44.019474	5
CCTAACT	9650	41.85346	2
GCCTAAC	9755	41.485973	1
CTCTAGT	11615	41.266228	6
TCGATTA	7050	40.100685	7
TAGTTGT	12030	39.348114	9
TCTAGTT	12400	38.875523	7
ATCGATT	7505	38.55092	6
GTACTCT	12600	37.75111	3
TACTCTA	13305	36.023094	4
TTGTACT	13840	34.900562	1
TGTACTC	13940	34.226826	2
GGAAGCA	14505	33.742905	3
TCATTAG	8510	33.656113	3
GATCGAT	8865	33.372902	5
ACACGTA	2520	33.096073	145
TAACTGC	12245	32.8054	4
CTTTTTT	40945	31.493809	1
TCGATCG	9380	30.302582	3