FastQCFastQC Report
Tue 31 Oct 2023
HMHF2DRX3_n01_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMHF2DRX3_n01_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93024714
Sequences flagged as poor quality0
Sequence length101
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTCTCTTATACACA7575360.8143384348378647No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGTAGAAATCTCG5966110.6413467715686824No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTCTCTTATACACA5185720.5574561615959389No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCTGTAGAAATCTC4230460.4547673212948551No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAAACTTCTGTAGAAATCTC4004060.4304297027991938No Hit
TCTGTCTCTTATACACATCTCCGAGCACACGAGACTTCTGTAGAAATCTC3570020.3837711341955859No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGTAGAAATCTCG3352260.36036230114074846No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGCAATAATCTC3298790.354614366242502No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGTAGAAATCTCG2900470.3117956374474852No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAATGGAGAATCTC2765520.2972887398503585No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCTGTAGAAATCTC2571920.2764770660837506No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAAACTTCTGTAGAAATCTC2407720.2588258427755016No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACATATGCATGTATCTC2328030.25025930206031055No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTCTCTTATACACA2325810.25002065580120997No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCTGTAGAAATCTC2301870.24744714614226065No Hit
ACTGTCTCTTATACACATCTCCGAGCACACGAGACTTCTGTAGAAATCTC2256960.24261939681964514No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGCAATAATCTC2245610.24139929094541482No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAAACTTCTGTAGAAATCTC2067840.22228931550383482No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACCACTCAATTCATCTC1985050.2133895300124223No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGTCTCTTATACAC1930960.2075749461589315No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGCAATAATCTC1837210.19749697913610353No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACCACTCAATTCATCTC1683480.18097126318496395No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACATATGCATGTATCTC1583550.17022895657599119No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGTAGAATTAATCTC1525620.16400157919324534No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGTAGAAATCTCG1437770.1545578522283874No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGCCGGTCAGATCTC1412950.15188974405231712No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTACTCATGATCTC1384580.14884001685831574No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAAACTTCTGTAGAAATCTC1383050.1486755444365032No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAATGGAGAATCTC1382480.1486142703970044No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTCTCTTATACACA1355060.14566666660216768No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACATATGCATGTATCTC1348520.14496362762265522No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGTCTCTTATACAC1279800.13757634342202868No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCTGTAGAAATCTC1186440.12754030074201572No Hit
GCTGTCTCTTATACACATCTCCGAGCACACGAGACTTCTGTAGAAATCTC1174780.1262868703901632No Hit
TCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTCACACGCATCTC1108890.11920380642073244No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGCAATAATCTC1095380.11775150418629612No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACCACTCAATTCATCTC1048410.11270230833496571No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGTAGAATTAATCTC1006130.10815727958056393No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACATGGCGCCTGATCTC975300.10484310653188357No Hit
ACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTACTCATGATCTC931450.10012930542307283No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)