FastQCFastQC Report
Thu 17 Nov 2022
HMGL2DRX2_l01_n02_Retina_01.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMGL2DRX2_l01_n02_Retina_01.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460584363
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGGTCGAGTGCCTCACAG22259010.4832775879540661Clontech SMARTer II A Oligonucleotide (100% over 25bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)